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Accession Number |
TCMCG066C18575 |
gbkey |
CDS |
Protein Id |
XP_034592806.1 |
Location |
join(8144382..8144456,8145105..8146193,8146617..8147854,8147932..8148072,8148948..8149191,8149260..8150024,8150345..8150539,8150696..8151342,8151882..8151933,8152008..8152659,8153988..8154196,8154291..8154826,8154937..8155041,8155135..8155201,8155314..8155391,8155940..8156008,8156112..8156192) |
Gene |
LOC117854690 |
GeneID |
117854690 |
Organism |
Setaria viridis |
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Length |
2080aa |
Molecule type |
protein |
Topology |
linear |
Data_file_division |
PLN |
dblink |
BioProject:PRJNA633601 |
db_source |
XM_034736915.1
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Definition |
E3 ubiquitin-protein ligase PRT6 [Setaria viridis] |
CDS: ATGGCCGGGATCGACGCCGGGGAGGGGGCGGCCGCCGCGCCGCCGGAGATGTCGCCGGAGCAGCGCATCGAGCAGAAGCTCATTCTCTATGGAGTACCCGAAGAGCAACTGCAAGAACACCAAGAAGGCTTACTCATGTACATAGAGAAGCACAAAGAGCAGATACCTGATATAGTGAGGCTGATCTTGTCAGTAGGTACTGATATTCTGGAGGCCCGAAAGCCCTCAAAGAAGGAATCAAGTAGCAGCAGCAGTGGCGATGCGTACAGTGAGAGTTTGTCTTGGTTGCAGTGGTTGATGTTCAACCATGAGCCAGAAGCGATGCTTCAAGACCTGGATCGTTCCTCTGCAGGAGATCGTGCTGTTTGTGGGTCAGTCTGGGGACAGAGTGATCTTGCGTATCGCTGCCGGACCTGTGAAAATGACCCCACGTGTGCAATTTGTGTCCCATGCTTCCAGAATGGCAATCACAAGGATCATGATTACTCCATCATGTATACAGGGGGTGGATGTTGTGACTGTGGAGATGCTACCGCCTGGAAGCGTGAAGGGTTCTGCTCAAAGCATAAAGGGGCCGAGCAGATTAAGCCTCTTCCAGAGGAGCTTGCACATTCTGTAGGACCTGTGCTGGATGTGCTTTTGCAGTTCTGGAAGGAGTGGATATGCCTGGTGGAACCACCCCCTGCAAAGGGTGATGGTAGTAGCTCATGCAAGAGGGTTGCTGAAGAGTTGACAATGTCAATTACTAACATGATGCTTCAGTTCTGCACTTGCAGTGAAAGCCTTCTTAGTTTTCTGTCCCTAAGGATCCGTGAGTGCCAAGATCTGTTGGATGCATTAATAAGGTCAGAAAGGTTGCTTGACAAGAAGGTTGCTAAAAAATTGCATGAGTTGCTATTGAAACTTATCAGCGATCCTGCTTTTAAGTATGAGTTTGCCAAGGTTTTTATACGCTACTACCCTGTCACATTTGGTGAAGTTATCAAAGGGTGCAATGATTCGCTACTGGAGGAGTATCCACTGATGCCAACTTTCTCTGTGCAAATATTCACAGTACCTACACTAACTACAAGGCTTGTGCATGAGGTTAATTTGTTGGGTGTTCTTCTTGGATGCTTGACAGATCTGTTTCTTTCTTGCATTGGTGAGGATGGTCGTTTACAGACAAACAAATGGGGAAACTTATTTGACGCTTCTGTTCGATTATTGGATGATACACGCTATGTCTTGAGTCATGAGGAAGTTTCTAAGTATGTTGCTTATGAGAGGCCTGATCTAACAAGGTCATGGATTAAGCTCTTATCACTTGTGCAAGGTATGGATCCTCAGAAGAGAGTGACAAGTATTCATGCTGAAGATGAAAATGAACATCTATCTGCACCTTTCGTGCTGGGGCACTATTTTGGAATTGTCCAGAACCTTCTGATAAAGGGTGCATTTTCTCCTCCTGATCAACATGAATCAACTGATGTTACTGTTTGCTCCTCTGCGATAAACGGCATGGAGAGTGCTGAAAATCAACGGCATGCAAAAGTTGGAAGGGTCTCCCAGGAGAGCTCAGTATCCAATTTAAGCATCCGAGACAGTTCTTTGAGTTGTGGTTTGCCGTCACCTGCTGCCTGGTTAATTCTTCAATGCCTGAAAGCTATTGAAAGTTGGTTGGAACCTGACATAGCTCTGAGGAGCAAGCTGTCATCCCTTGATCCTAGCAGCAGCGATTCTCGTAATTTTATGGCTTCGCCTGAAGATCGGACTTCTGATAAGGGAACCAGTTCAAATACAAATATAGGCGTGATGGGTGTCAAGATAAATGAAGGATCACAACCAGATGGTACTGCAGATTATCGTGATGTATCTAGTTCTCCTGTTCATGGTAATTGCGACAGGATGCAGATTGACCAAGAAGAGATACCTTCAGCTAGTAACAGGACAGGCAAAGGGAAGATGCATGACAGCAGCAACACTACAGATATAGAGTTGCACCCTGAGAATGCCATTACTTATACTCTGACTGACGGTAGCCTTTTGCACGCTCATCCTGATTCAAGAATCGAGGAACTAGGAATACTCAACACAAGAGGTTGGCCTCATGTTATCTTTGACGTCAGTTCACAAGAAACTTCTTTCCATATCCCTTTGCACCGTATGCTTTCATTGCTGTTGCGGAAGGCGATGAAGAAATGTTTTGGAGAGGATGCCAGGCCAGATGAACATTCAGTTGTGCAATCCTGTGAGTTCTTTTCTCAGGTACTTAGAGGTTGTGAGCCTTATGGGTTTGCTTCGATTGTGATGGAGCATCCACTGAGAGTCAGAGTATTTTGTGCACAAGTGCGTGCTGGAATGTGGCGTAAGAATGGTGATGCAGCTATACTGAGTGCTGAGTGGTACCGCTCTGTGCAATGGCTTGAACAAGGTCTGGAGTCAGATCTGTTTCTTCTTCAATGCTGTGCTGCACTATCTTCTCCAGAGTTCTTTGTACGAACAATTCAAGAGCGATTTGGTTTGTCCAGTTATACATCTTTGGATCTTGCGGAACAGAATGAGTATGAGTCAGTTCTAATGCAGGAAATGCTAACTTTTCTTATACAATTGGTTAAAGAACGCCGTTTTTGTGGGCTTTCCACAGCAGACAACTTGAAGAGGGAATTGATTTATAAGTTAGCTATTGGAGATGCCACTCATAGCCAGATTGTGAAGTCTCTTCCTCGCGATCTTTCATCAAGTGACCAACTTCAAAATGTTCTGGATTCACTGGCAGTTTATTCTAATCCATGCGGCATGAAGCAGGGTAAGTATGTACTTCGCAAATCGTGCTGGAACGAATTGGACTTGTATCACCCCCGCTGGAATTCTAGGGAATTGCAAATTGCGGAGGAGAGATATTACCGTTTCTGCAAAACTTCTGCTCTTAATGCTCAGCTACCTCGGTGGACTCACGTTTTTAGCCCACTGAGAAGTATTTCTAACGTTGCAACCTCAAAGGCTGTCCTTCAGATTGTTCGTGCTGTTCTCTTTTATGCTGTTTACAGTGAAGCATCATCAGCATCACGCGCCCCTGATAATGTTCTCGTGACGGGTTTACATCTGCTTTGGTTGGCACTTGATATTTGTGAATCAGAAAGACAAGTACATGCCGACCAGTATGGCATGGATGTGGTGCAGCATGATGATGAATCATGGGTTGTTCTGTCATCGTACACAGAAGAGGCTTTTCCCATATTGACTTACTCTACTGAAGTAGTTTCCCCGGAGTCTGACAATGTAAAGAAAGAAAGCATGTTAACCCTACTTGTGTTGCTAATGCACAAATACAAAGAAGAGAATGATGCCACCTTTTCTGGATCCAAGTACTGTAATATTCCATCCCTAATTGAGAGCTTATTGAAGAAATTTGCCAAGTTAAGTAAGAAGTGCATGTTTACATTAAGACAAATGGCGCCACATGTAGTCCCATCTACACCAGACAGTTCCAGTATCAAAGAAAGCCTAGGAACTTCATCAGATCCCATGGAAAAGAAAGCAAAAGCACGTCAACACCAAGCTGCAATTATGGCGAAGATGAGGGCAGAGCAGTCCAAATTTGCTGAAAGTATGAAGTCATCAGAAAACGAGGGGCATGATGTTCCAATGTTAGAGACAGATGTGTCCAGTTCAACTGGTGCGGTCTCTGAGGAGTCACTACCAGTTTGCTCCTTGTGCCGGGACTCGGACTCCAAAAGCCCTCTATGCTATTTGATTCTTCTTCAGAAATCTCGGCTTGCAACTTTTGTTGAGATGGGTCATCCATCCTGGGATAATCCAACTCAAGCAAACAAGACGTCTGGATCAGTCAAGAAGGAAGATTCAACTGATTCCTTGGTCTCTGGTTCTTCAACTTCCGAGGAACTTGTCGATGACACGACAGTAGAGCCATCTTTTGATTTAGACAGCATGGAAGTTGATGCCTTTCTTGATTTTTCAAATGAGCAGCATCCACTAATTCGATATATATCGTCTTTCCCAAGTGGACATTGCAATGGCAATGCAGATGACACTGTCTCGCTTGAGGCAATTGAGGCTGATATTTACAACTCTATTTTAAATGATGTATTTGGATCCAGTAATGCACACATTCAGAATGCTGAGCAAACGTCGCCATCATCTGCTTCAAGTATCACAGTTGATTCCAAGAAAACCAGAAGCCCCAAGCGTTCTGTGCTGGGAACATATGTTAGTTGTCTATCAGCAAAACACCGCCATTCTTCACTCTATGATGTAGCTTCCAAATCTTCTGCCTCTGTTAGTACAAGAAACAAGTTTGGTCCGCTTCATTGTGATGGCATCCACATTTCTTCTTGTGGACATGCTGTACATCAGGAATGCCATGATCGGTATTTGTTCTCCTTGAAACAAAGATATGTCCGGAGACTTGGTTTTGAAGGTGGTCATATTGTCGATCCTGATCTGGGAGAGTTGCTTTGTCCAGTATGTCGCAGATTTGCGAATTCCATTCTTCCAGCATCAACTGATTTCTCTAGTAAAACATTGAAGGGGAAACCATTTGTTGAAACCTTGACCCGTGAAGTTGTTATTACAACTACGTCACATCTAAATACAAGTCACTTACAGTTTCCTCGAGCACTATCACTTCTTGAAAGTGCTGGAAAAACTGTTGGACAAAGCAAGTTTCTAAAAGCTTTATCAGGGAAGCTTAATGATACTACAGAGTCATCCCTAGAACCTTCTCTTCGAAGATTAGCCATGCTTTACTATCATCGTGGTCCCAGCGGTTTTTCAGCATCTGAAAGGAAAAGGCTCAATCCATCCTTGTTTCTCTGGGATACACTAAGGTACTCTGTGGTATCTACAGAAATTGCTTCTCGTGGTAGGATGTTAAACCAGTCTGCTGAGTCAAAGTCCTGCTTGGAATCTTTGCGTGGTGAACTGAATTCATCAAGTGGATTCATATTGTCCCTATTATTCCGTGTTGCTCACTCTGCACGAAATTTGAATCGTCTTGAGGTTCTTTTAAGGTTTGAAGGTATCCAACTATTAGCGGGGTCTATTTGCTCTTGCATTTCTGGTTATAAAGACGTTCTTAATGCTACTAAGCGAAAAGGCTCTTTGCCACCTATGGTTGATCCAGGTGAGGAGGGTCCCCTCTTCCCTGACGTCCAATTTTGGAAACAGTGTGCTGATCCAGTCCTTGCTCAAGATCCATTTTCTTCTTTGATGTCAACACTTTTCTGTCTACCTGTTCAGTTTGTATCATCTGCTGAATTCTTCATCCCTTTTGTCCATCTGTTTTATGTTGTTTGTGCCATTCAGGCCCTGATAACATGCTACGGATCGGAAACTTTTGACCGATCTAGCTTCAGTGACTGCCTTCTTAATGATGTTTGCAAGACAATGTCAGGATATGATATTGCCAGAGAGTATTTTGTATCCAAATATATCGACCCGTATTGTCATCCAAAAGATATGGTCCGTAGATTGACGTATCCTTATCTTCGGAGATGTGCATTGCTTTGGGAGCTGCTAAGATCGTCTGCCACATCACCCTTATATGACAATTCCAATATTTGGGAAGGATCACATCTTTACCTGAGCAATAGCACACAAGATGGAAGTTCTTCACTGGCAATGGAGCTAAATGGAATAAGCGAATTGGAAAAGCTGTTCCAGATTCAGTCACTGGACCTGATTCTCCGAGATGAATCTGTACATGTGCTGGCCTTAAAATGGTCTCAACATTTCTGTGAAGATTACAGTTCTCGCAAATATAGAGGCTCTCTCTTTTCTACCCCTGCAGTTCCATTTAGGCTGATGCAACTACCACCTGTCTACCAAGTTCTCCTTGAAAGATATATCAAGATGCAATGCCCCGATTGTGGCTCAGTGCCTGATGAACCGGCATTGTGTTTGCTTTGTGGCAAACTATGTTCACCTAGCTGGAAACCATGCTGCAGGACTGGTAAATGCCTGAATCATGCATCACAATGTGGTGCCGGTGTTGGCATATTTCTTTTAGTGAGGAAAACAACGATCCTGTTGCAGCGATCTGCTCGTCTTGCCTTTTGGCCATCTCCTTACCTTGACACGTTTGGGGAGGAGGATCATGAAATGCAGAGAGGAAAGCCTTTGTATCTAAGTCAAGAAAGATACACAGCCTTGACCTATCTGGTGGCATCTCATAGCCTTGATCGAACTTCTGAAGTCCTTCGGCAAACGACTATCAGCTTTTATGGATCTGGATCTGATTAA 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Protein: MAGIDAGEGAAAAPPEMSPEQRIEQKLILYGVPEEQLQEHQEGLLMYIEKHKEQIPDIVRLILSVGTDILEARKPSKKESSSSSSGDAYSESLSWLQWLMFNHEPEAMLQDLDRSSAGDRAVCGSVWGQSDLAYRCRTCENDPTCAICVPCFQNGNHKDHDYSIMYTGGGCCDCGDATAWKREGFCSKHKGAEQIKPLPEELAHSVGPVLDVLLQFWKEWICLVEPPPAKGDGSSSCKRVAEELTMSITNMMLQFCTCSESLLSFLSLRIRECQDLLDALIRSERLLDKKVAKKLHELLLKLISDPAFKYEFAKVFIRYYPVTFGEVIKGCNDSLLEEYPLMPTFSVQIFTVPTLTTRLVHEVNLLGVLLGCLTDLFLSCIGEDGRLQTNKWGNLFDASVRLLDDTRYVLSHEEVSKYVAYERPDLTRSWIKLLSLVQGMDPQKRVTSIHAEDENEHLSAPFVLGHYFGIVQNLLIKGAFSPPDQHESTDVTVCSSAINGMESAENQRHAKVGRVSQESSVSNLSIRDSSLSCGLPSPAAWLILQCLKAIESWLEPDIALRSKLSSLDPSSSDSRNFMASPEDRTSDKGTSSNTNIGVMGVKINEGSQPDGTADYRDVSSSPVHGNCDRMQIDQEEIPSASNRTGKGKMHDSSNTTDIELHPENAITYTLTDGSLLHAHPDSRIEELGILNTRGWPHVIFDVSSQETSFHIPLHRMLSLLLRKAMKKCFGEDARPDEHSVVQSCEFFSQVLRGCEPYGFASIVMEHPLRVRVFCAQVRAGMWRKNGDAAILSAEWYRSVQWLEQGLESDLFLLQCCAALSSPEFFVRTIQERFGLSSYTSLDLAEQNEYESVLMQEMLTFLIQLVKERRFCGLSTADNLKRELIYKLAIGDATHSQIVKSLPRDLSSSDQLQNVLDSLAVYSNPCGMKQGKYVLRKSCWNELDLYHPRWNSRELQIAEERYYRFCKTSALNAQLPRWTHVFSPLRSISNVATSKAVLQIVRAVLFYAVYSEASSASRAPDNVLVTGLHLLWLALDICESERQVHADQYGMDVVQHDDESWVVLSSYTEEAFPILTYSTEVVSPESDNVKKESMLTLLVLLMHKYKEENDATFSGSKYCNIPSLIESLLKKFAKLSKKCMFTLRQMAPHVVPSTPDSSSIKESLGTSSDPMEKKAKARQHQAAIMAKMRAEQSKFAESMKSSENEGHDVPMLETDVSSSTGAVSEESLPVCSLCRDSDSKSPLCYLILLQKSRLATFVEMGHPSWDNPTQANKTSGSVKKEDSTDSLVSGSSTSEELVDDTTVEPSFDLDSMEVDAFLDFSNEQHPLIRYISSFPSGHCNGNADDTVSLEAIEADIYNSILNDVFGSSNAHIQNAEQTSPSSASSITVDSKKTRSPKRSVLGTYVSCLSAKHRHSSLYDVASKSSASVSTRNKFGPLHCDGIHISSCGHAVHQECHDRYLFSLKQRYVRRLGFEGGHIVDPDLGELLCPVCRRFANSILPASTDFSSKTLKGKPFVETLTREVVITTTSHLNTSHLQFPRALSLLESAGKTVGQSKFLKALSGKLNDTTESSLEPSLRRLAMLYYHRGPSGFSASERKRLNPSLFLWDTLRYSVVSTEIASRGRMLNQSAESKSCLESLRGELNSSSGFILSLLFRVAHSARNLNRLEVLLRFEGIQLLAGSICSCISGYKDVLNATKRKGSLPPMVDPGEEGPLFPDVQFWKQCADPVLAQDPFSSLMSTLFCLPVQFVSSAEFFIPFVHLFYVVCAIQALITCYGSETFDRSSFSDCLLNDVCKTMSGYDIAREYFVSKYIDPYCHPKDMVRRLTYPYLRRCALLWELLRSSATSPLYDNSNIWEGSHLYLSNSTQDGSSSLAMELNGISELEKLFQIQSLDLILRDESVHVLALKWSQHFCEDYSSRKYRGSLFSTPAVPFRLMQLPPVYQVLLERYIKMQCPDCGSVPDEPALCLLCGKLCSPSWKPCCRTGKCLNHASQCGAGVGIFLLVRKTTILLQRSARLAFWPSPYLDTFGEEDHEMQRGKPLYLSQERYTALTYLVASHSLDRTSEVLRQTTISFYGSGSD |